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Value of sockeye salmon resources in Bristol Bay. Sockeye salmon were the most valuable fishery in the United States, assessed at 7.9 billion $US between 1950 and 2008. Bristol Bay produced 63% of this total translating into a cumulative landed value of about 5 billion $US over this time period (http://www.st.nmfs.noaa.gov/st1/commercial/landings/annual_landings.html). These estimates do not include any of the economic benefits of processing and auxiliary industries, so $5 billion is an underestimate of the total value of the commercial fishery since 1950. Wholesale values are typically about twice the landed values. An average of 29M adult sockeye returned to Bristol Bay watersheds between 1958 and 2008, and returns observed in the last two decades (average = 37M) were higher than for any other decade in the last century because of favorable conditions for growth and survival in the ocean. The landed value of the commercial fishery averaged $US 176 million from 1985-2004 32 (adjusted to 2004 $US). The value of all ecosystem services supported by salmon in Bristol Bay was estimated to be approximately 324 million $US in 2005, of which 234 million $US were derived from the wholesale value of salmon caught by the commercial fishery, 61 million $US were derived from sport fishing, and the remainder from a combination of subsistence expenditures, wildlife viewing, and hunting 33. The Bristol Bay ecosystem supports many ecosystem services in addition to those provided by salmon but these have not yet been valuated. Variance scaling in data Tilman et al. (1998) 34 showed that the relationship between the variance of an asset (σ 2 i) and its mean abundance (m i ) can be described by the relationship σ 2 i = cm z i, where c is a constant and z is a parameter describing how the variance scales with the mean. Statistical averaging is an important component of portfolio effects when the value of z is greater than 1. We fit this scaling relationship to the data considered at the three levels of spatial aggregation described in the main paper (i.e., among rivers, among total returns to stream populations in the Wood River watershed, and spawning population sizes in streams of the www.nature.com/nature 1

Wood River watershed). For each of these data sets, a strong power relationship existed between the variance and the mean (r 2 values: 0.97, 0.70, 0.94, respectively), and the parameter z was substantially greater than 1 (2.2, 1.7, and 1.9 respectively). Thus, a large component of the portfolio effects observed in the sockeye stock complex in Bristol Bay derives from statistical averaging of the inter-annual returns to various components of the stock complex. www.nature.com/nature 2

Supplementary Fig. 1. Map of the Wood River system in Bristol Bay, Alaska. Dots show the outlets of streams and rivers that support distinct populations of sockeye salmon. Labeled sites are those for which long-term data on spawner abundance was used for estimating the co-variation among returns. www.nature.com/nature 3

Supplementary Fig. 2. Histograms of pairwise correlations in annual sockeye returns to major rivers of Bristol Bay (top panels) and streams of the Wood River system (bottom panels). Annual sockeye returns to Bristol Bay rivers between 1956 and 2008 had an average correlation of 0.41 (range: -0.32 to 0.75), and only 39% of the pair-wise comparisons were statistically significant (p 0.05, shown in dark shading). At the scale of individual populations in streams of the Wood River system (n = 8), the average correlation between populations was 0.25 (range: -0.47 to 0.76), with only 45% of the comparisons being statistically significant (shown in dark shading), of which 6% were negative. A phase shift of the Pacific Decadal Oscillation in the late-1970s was associated with increased abundances of most components of the Bristol Bay sockeye stock complex, thereby strengthening co-variation among stock components when considering the entire time frame from 1956-2008. When the co-variation structure was examined before and after the 1977 regime shift, correlations among components of the stock complex shifted closer to zero. The frequency distribution of pair-wise correlations for the entire time series is shown in the first column, and before (middle column), and after (right column) the PDO shift in the late 1970s. Average correlation coefficients are: rivers: 1956-1978, mean r = 0.34, 1979-2007, mean r=0.15; streams 1956-1978, mean r=0.37, 1979-2007, mean r=0.21. www.nature.com/nature 4

2.0 a) Stream populations Dominant Subdom Overall 1.6 1.2 CV 0.8 0.4 0.0 Bear Hansen Happy Ice Fenno Hidden Lynx Pick Stream population b) River stocks 2 1.6 1.2 CV 0.8 0.4 0 Branch Egegik Igushik Kvichak Naknek Togiak Ugashik Wood River stock c) Bristol Bay stock complex 1.2 1 0.8 CV 0.6 0.4 0.2 0 1.2 1.3 2.2 2.3 overall Age class Supplementary Fig. 3. Coefficient of variation (CV) observed for the dominant age classes of sockeye compared to the CV for the entire population, stock or stock complex. Data are shown for a) stream populations, b) river stocks, and c) the entire Bristol Bay stock complex. For rivers and streams we considered only the two dominant age classes in each system. Because there are four dominant age classes that comprise the run at the Bristol Bay scale, we evaluated the variability in all four age classes at this coarsest spatial scale. www.nature.com/nature 5

Supplemental References: 32. Clark, J.H, McGregor, A., Mecum, R.D., Krasnowski, P., & Carroll, A.M. The commercial salmon fishery in Alaska. Alaska Fishery Research Bulletin 12 (2006). 33. Duffield, J., Patterson, D., Neher, C., & Goldsmith, O.S. Economics of wild salmon watersheds: Bristol Bay, Alaska. In: Watson, A., Sproull, J., Dean, L., Eds. Science and stewardship to protect and sustain wilderness values: Eighth World Wilderness Congress symposium; September 30-October 6, 2005; Anchorage, AK. Proceedings RMRS-P-49. Fort Collins, CO: U.S. Department of Agriculture, Forest Service, Rocky Mountain Research Station. p. 35-44 (2007). 34. Tilman, D., Lehman, C.L., & Bristow, C.E. Diversity-stability relationships: statistical inevitability or ecological consequence? Am. Nat. 151, 277-282 (1998). www.nature.com/nature 6