STOCK ASSESSMENT OF ALBACORE TUNA IN THE NORTH PACIFIC OCEAN IN 2011

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STOCK ASSESSMENT OF ALBACORE TUNA IN THE NORTH PACIFIC OCEAN IN 2011 Report of the ISC-Albacore Working Group Stock Assessment Workshop 3rd Science Advisory Committee Meeting Inter-American Tropical Tuna Commission La Jolla, CA 15-18 May 2012

Program Methodology Model structure Fisheries Input data Assumptions & Parameterization Base-case results Fit diagnostics & parameter estimates Biomass (B, SSB), recruitment, & F-at-age Sensitivity & Fishery Impact analyses VPA Reference Run Projections Conclusions on status and advice

Logistics Originally scheduled 14-29 March 2011 in Shimizu, Japan, but rescheduled because of earthquake/tsunami Modeling Subgroup Meeting 30 May-3 June Develop recommended base-case model, sensitivity analyses, & future projection scenarios for assessment workshop Alex da Silva (IATTC) attended and helped with important decisions Simon Hoyle (SPC) helped develop model via email discussions Assessment Workshop 4-11 June Full assessment of the north Pacific albacore stock using fishery data through 2009 Develop scientific advice & recommendations on current stock status, future trends, and conservation.

Methodology Stock Synthesis (SS) Ver 3.11b modeling platform; key advancement relative to 2006 (VPA model) Seasonal, length-based, age-structured, forwardsimulation population model VPA reference run for model-related changes Projections of albacore population dynamics used to assess the impact of current fishing mortality and management on future harvest and stock status

Input Data 16 fisheries defined by gear, location, season, and the unit of catch (numbers or weight) Quarterly Catch for each fishery (weight) Quarterly length comps for each fishery (8) Bin range: 26-140 cm CPUE indices (8 indices) Conditional length-atage data from otoliths (Wells et al. 2011) for F1, F2, F6s1, F8 Fishery F1 F2 F3 F4 F5 F6s1 F6s2 F7s1 F7s2 F8 F9 F10 F11 F12 F13 F14 Description CAN/USA Troll USA LL EPO Miscellaneous Japan Pole-and-line (south) Japan Pole-and-line (north) Japan offshore longline (north/season 1/number of fish) Japan offshore longline (north/season 2/numbers of fish) Japan coastal longline (north/season 1/weight) Japan coastal longline (north/season 2/weight) Japan offshore longline (south/north season 3-4/number of fish) Japan coastal longline (south/north season 3-4/weight) Japan gillnet Japan miscellaneous Taiwan longline Korea and others longline Taiwan and Korea gillnet

Albacore Time Series Length by Data Type & Fishery

Spatial Definition of Fisheries F1 Can/US troll F2 USA LL F3 EPO misc. F4 JPN PL LF F5 JPN PL SF F6 JPN OLLF1 SF F7 JPN CLLF1 SF F8 JPN OLLF2 LF F9 JPN CLLF2 SF F10 JPN GN F11 JPN Misc. F12 - TWN LL F13 KO LL (Korea & others) F14 TK GN (Taiwan & Korea)

Catch History 140,000 F14 120,000 F13 100,000 80,000 60,000 40,000 F12 F11 F10 F6 to F9 F4 + F5 F3 F2 F1 20,000 0 1966 1968 1970 1972 1974 1976 1978 1980 1982 1984 1986 1988 1990 1992 1994 1996 1998 2000 2002 2004 2006 2008 Catch (mt) Year

Average Length Compositions

Input CPUE Data 8 indices 2.5 2 1.5 1 0.5 0 S1 - CAN/USA TR 1960 1970 1980 1990 2000 2010 2.5 2 1.5 S3 - JPN PL S5 1985-2009 S4 1972-84 3 2.5 2 1.5 1 0.5 0 S2 - USA LL S8 - TWN LL 1960 1970 1980 1990 2000 2010 S6 - JPN LL(north) S7 - JPN LL (south) 1 0.5 0 1960 1970 1980 1990 2000 2010 Surface fisheries Can/USA troll S1 JPN P&L S3, S4, S5 Longline fisheries USA S2 JPN Offshore S6 JPN Coastal S7 TWN Offshore S8

Base-case Assumptions Basic Modeled period:1966 2009 Area:120 E 120 W, 10 55 N Stock:one stock, well mixed Sexes: combined Movement: not explicitly modeled Biological Spawning period: Q2 Recruitment: once a year in Q2 M= 0.3 yr -1 fixed for all ages Maturity (Ueyanagi 1957) 50% age-5, 100% age-6 Maximum age: 15 years Quarterly W-L relationships (Watanabe et al. 2006) Weight (kg) Stock-recruitment Beverton and Holt model Steepness (h) = 1 Data Weighting Downweight length comp (0.01) & otolith data (0.1) CPUE CVs fixed; S6 JPN LL CPUE (CV = 0.2) used as abundance indicator Length-Weight relationship 90 80 70 60 50 40 30 20 10 0 0 50 100 150 200 Fork Length (cm) Q1 Q2 Q3 Q4

Growth Parameterization Key change from 2006 assessment VB growth model parameters estimated by SS (L 1, L, K, CVs) Conditional length-at-age data from otoliths (Wells et al. 2011: ISC/11/ALBWG/02) 2006 assessment fixed growth curve to Suda (1966) growth parameters

Parameterization Initial F estimated for F1, F4 (surface fisheries) & F7 (LL) Initial equilibrium catch = 14 year average of total catch (1952-1965). Average catches were: F1 = 19,499 t F4 = 28,575 t F7 = 18,180 t

Parameterization Relative weighting of CPUE indices (CVs) S1 (F1) = 0.4 (1966-1999), = 0.5 (2000-2009); S2 (F2) = 0.5; S3 (F4) = 0.3; S4 (F5) = 0.3 (1972-1984); S5 (F5) = 0.4 (1985-2003), = 0.5 (2004-2009); S6 (F6s1) = 0.2 (model tuned to this index) S7 (F8&F9) = 0.4; S8 (F12) = 0.5.

Selectivity Fishery Description Selectivity Pattern F1 CAN/USA Troll Dome-shape F2 USA LL Asymptotic (catches largest fish) F3 EPO Miscellaneous Mirror F1 F4 Japan Pole-and-line (south) Dome-shape F5 Japan Pole-and-line (north) Dome-shape F6s1 Japan offshore longline (north/season 1/number of fish) Dome-shape (2 time periods) F6s2 Japan offshore longline (north/season 2/numbers of fish) Dome-shape F7s1 Japan coastal longline (north/season 1/weight) Mirror F6s1 F7s2 Japan coastal longline (north/season 2/weight) Mirror F6s2 F8 Japan offshore longline (south/north season 3-4/number) Asymptotic (catches largest fish) F9 Japan coastal longline (south/north season 3-4/weight) Mirror F8 F10 Japan gillnet Mirror F5 F11 Japan miscellaneous Mirror F5 F12 Taiwan longline Dome-shape (2 time periods) F13 Korea and others longline Mirror F6s1 F14 Taiwan and Korea gillnet Mirror F5

Time Blocks for Selectivity Time-varying selectivity noted in length data from 3 fisheries so blocking implemented as follows: F2 (USA LL): 2001-04, other years F6s1 (JPN Offshore LL): 1966-1992, 1993-2009 F12 (TWN LL): 1995-2002, 2003-2009

Base-case Model Results Model Fit Diagnostics CPUE Length composition data Model Parameter Estimates Growth Estimated selectivity patterns Stock Assessment Results Biomass Recruitment F-at-age

Model Fits to CPUE Indices S1 S2 S3 S4 S5 S6 S7 S8 Fits considered cceptable given the relative weightings (CVs) on indices

Aggregated Length Composition Data Fits to length composition data were good considering downweighted with lambda = 0.01 Fits may be the result of the clear and relatively stationary modes in the data

Length Composition Residuals F1 F2 F4 F5 F6s1 F6s2 F8 F12 Positive residual patterns, especially for large fish in F6s1 (mid- 1980s to early 1990s) and F8 (1980s to mid-1990s)

Growth Comparison Suda Growth Curve L1 =40.2 cm L = 146.46 cm K = 0.149 yr -1 Model estimates L1 = 44.4 cm L = 118.0 cm K = 0.2495 yr -1 Wells et al. (2011) L1 ~ 50 cm L = 120.0 cm K = 0.184 yr -1

Selectivity Patterns F1 F4 F5 F12 1995-2002 2003-2009 F2 2001-2004 Other years F8 F6s1 1966-92 1993-2009 F6s2 Selectivity of other fisheries mirrored to these fisheries

Biomass Results

Recruitment Age 0

Fishing Mortality SS3 Base case 0.2 F2002-2004 F2006-2008 F 0.1 0.0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 Age Current F = geometric mean of 2006-2008 (this assessment) F 2002-2004 current F in 2006 assessment (geometric mean of 2002-2004)

Retrospective Analysis Uncertainty in terminal year estimates, particularly recruitment, but not biased

Sensitivity Analyses Data Weighting Drop each CPUE set lambda = 0 for each fishery Length lambda 0.025, 0.001 Estimate CV for CPUE fix JPN LL =0.2 estimate other CVs Biological assumption Fix growth to Suda growth curve Up-weighting of age composition data lambda = 1.0 Steepness: h=0.85 M=0.4 yr -1 all ages Length-based maturity schedule Selectivity Change selectivity of JPN LL(Fnorth) from dome shape to Flat top No time block for USA LL, TWN LL, JPN LL Fishery Impact Analysis

Sensitivity Results Dropping CPUEs SSB (thousand mt) 900 800 700 600 500 400 300 200 100 B. D. A. C. SSB Base case DropS1 DropS2 DropS3 DropS4 Recruitment (thousand fish) 120 100 80 60 40 20 Base case DropS1 DropS2 DropS3 DropS4 Recruitment 0 1965 1970 1975 1980 1985 1990 1995 2000 2005 2010 0 1965 1970 1975 1980 1985 1990 1995 2000 2005 2010 SSB (thousand mt) 900 800 700 600 500 400 300 200 100 SSB Base case DropS4S5 DropS6 DropS7 DropS8 Recruitment (thousand fish) 120 100 80 60 40 20 Base case DropS4S5 DropS6 DropS7 DropS8 Recruitment 0 1965 1970 1975 1980 1985 1990 1995 2000 2005 2010 0 1965 1970 1975 1980 1985 1990 1995 2000 2005 2010 S7 was the most influential index for scaling & trends in SSB & recruitment Dropping S1 and S2 scaled SSB up relative to the base-case

Sensitivity Results - Length Composition Data Weighting SSB (thousand mt) 800 700 600 500 400 300 200 100 A. B. C. D. E. SSB Base case Lencomp0.001 Lencomp0.025 Recruitment (thousand fish) 120 100 80 60 40 20 Base case Lencomp0.001 Lencomp0.025 Recruitment 0 1965 1970 1975 1980 1985 1990 1995 2000 2005 2010 0 1965 1970 1975 1980 1985 1990 1995 2000 2005 2010 Up-weighting (lambda = 0.025) & down-weighting (lambda = 0.001) scales SSB and recruitment up & down relative to base-case. Changing lambda does not alter trends or trajectories in either quantity.

Sensitivity Results Steepness, h = 0.85 700 600 SSB Base case h0.85 160 140 Base case h0.85 Recruitment SSB (thousand mt) A. B. C. D. E. 500 400 300 200 SSB (thousand mt) 120 100 80 60 40 100 20 0 1965 1970 1975 1980 1985 1990 1995 2000 2005 2010 0 1965 1970 1975 1980 1985 1990 1995 2000 2005 2010 h = 0.85 increased the scaling of SSB & recruitment Increases are likely related to the model having relatively little information on virgin biomass & recruitment to anchor the stock-recruitment relationship

Sensitivity Results M = 0.4 yr -1 700 A. B. C. D. E. 600 SSB Base case M0.4 100 90 80 Base case M0.4 Recruitment SSB (thousand mt) 500 400 300 200 SSB (thousand mt) 70 60 50 40 30 100 20 10 0 1965 1970 1975 1980 1985 1990 1995 2000 2005 2010 0 1965 1970 1975 1980 1985 1990 1995 2000 2005 2010 Higher scaling of SSB & recruitment

Sensitivity Results Growth fixed to Suda growth parameters SSB (thousand mt) 600 500 400 300 200 100 SSB Base case GrowthSuda Recruitment (thousand fishmt) 90 80 70 60 50 40 30 20 10 Base case GrowthSuda Recruitment 0 1965 1970 1975 1980 1985 1990 1995 2000 2005 2010 0 1965 1970 1975 1980 1985 1990 1995 2000 2005 2010 5.0 Base case 5.0 GrowthSuda F2002-2004 4.0 F2006-2008 4.0 Relative F 3.0 2.0 Relative F 3.0 2.0 1.0 1.0 F2002-2004 F2006-2008 0.0 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 Age 0.0 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 Age SSB & recruitment decreased relative to the base-case model F-at-age was much higher for all age classes, with a different pattern & higher F at older ages than in the base-case model Total likelihood of the base-case model was more than 100 units better than the Suda sensitivity run

Sensitivity Results - Asymptotic Selectivity for F6 SSB (thousand mt) SSB 600 Base case 500 F6selexlogistic 400 300 200 100 0 1965 1970 1975 1980 1985 1990 1995 2000 2005 2010 Recruitment (million fish) Recruitment 90 80 Base case F6selexlogistic 70 60 50 40 30 20 10 0 1965 1970 1975 1980 1985 1990 1995 2000 2005 2010 5.0 Base case 5.0 F6selexlogistic F2002-2004 F2002-2004 4.0 F2006-2008 4.0 F2006-2008 Relative F 3.0 2.0 Relative F 3.0 2.0 1.0 1.0 0.0 0 2 4 6 8 10 12 14 Age 0.0 0 2 4 6 8 10 12 14 Age Lower SSB & recruitment relative to the base-case, no changes in the trends F-at-age is higher & for large fish is higher relative to younger fish Total likelihood increased by more than 10 units relative to the base-case, i.e., the assumption of asymptotic selectivity for F6 leads to a poorer fitting model.

Sensitivity Analyses - Summary Scaling of SSB is substantially affected by: the weighting of CPUE & length composition data; dropping S7 (JPN OLLF larger-average sized fish); the selectivity assumption for fishery F6; and the growth curve. Magnitude of change in recruitment estimates was less than observed for SSB estimates F-at-age pattern affected by fixing the growth curve to the Suda (1966) parameter estimates & selectivity assumption for F6 Sensitivity runs with Suda growth parameters and F6 asymptotic selectivity produced biomass estimates similar in scale to VPA reference run

Fishery Impact Analysis 1000000 900000 800000 700000 LL Other Current biomass Surface Unexploited biomass SSB (MT) 600000 500000 400000 300000 200000 100000 0 1966 1970 1974 1978 1982 1986 1990 1994 1998 2002 2006 Year

VPA Reference Run Assumptions 6 age-aggregated fisheries and CPUE indices Growth: fixed to Suda(1966)growth parameters M = 0.3 yr -1 fixed for all ages Maturity: 50% age 5, 100% age 6 (Ueyanagi 1957) CAA updated through 2009

Black 2006 stock assessment Red this study (base case) VPA - SSB

VPA Recruitment at Age 1 Black 2006 stock assessment Red this study (base case)

VPA Fishing Mortality Red current assessment Black 2006 assessment

VPA SS3 Output Comparison Red SS3 base-case Black dashed VPA reference Black circles SS3 using growth fixed to Suda curve

Future Projections Base-case scenario F:constant at F 2006-2008 Recruitment:average 1966-2007 = 47.9 million Start year:2008 Harvest scenarios F 2002-2004 Constant catch treated as sensitivity run Recruitment scenarios low recruitment phase (1978 to 1987): 35.2 million high recruitment phase (1988-2004): 54.4 million Sensitivity Runs Fix growth parameters to Suda estimates SR steepness, h = 0.85 Length comp data weighting, lambda = 0.001

Future Recruitment Recruitment Base-case: 1966 to 2007: 47.9 million low recruitment phase (1978 to 1987): 35.2 million high recruitment phase (1988-2004): 54.4 million

Future Projection Results F 2006-2008 white F 2002-2004 - grey Historical median SSB Lower 25 th percentile Lower 10 th percentile & ATHL SSB (scaled by 2008 SSB) 1.400 1.200 1.000 0.800 0.600 0.400 0.200 0.000 2005 2010 2015 2020 2025 2030 2035 2040 Base case Run 1 (Previous current F) Run 2 (Low recruit) Run 3 (High recruit) Run 4 (growth curve) Run 5 (Length lambda) Run 6 (Steepness=0.85) Scaled to SSB 2008

Biological Reference Points Ratio: F 2006-2008 /F ref point F2006-2008/Fref point Ratio 1 0.8 0.6 0.4 0.2 0 FSSB- ATHL FMAX F0.1 FMED F20% F30% F40% F50% Reference Point

Assessment Conclusions Uncertainty in estimates of biomass (total and SSB) and fishing mortality Trends in SSB & recruitment are robust to the different plausible assumptions tested by the WG Estimates of F 2006-2008 (current F) expressed as ratio relative to several F-based reference points are less than 1.0 SSB is currently around the long-term median of the stock and is expected to fluctuate around the historical median SSB in the future assuming constant F 2006-2008 and average historical recruitment persist

Assessment Conclusions The current assessment results confirm that F has declined relative to the 2006 assessment and that this conclusion is robust to the different plausible assumptions tested by the WG The lower F found by this assessment is consistent with the intent of the previous (2006) WG recommendation, which was that current fishing mortality rate [F 2002-2004 ] should not be increased. However, with the projection based on the continued current high F, the fishing mortality rate will have to be reduced.

Stock Status WG concludes that overfishing likely is not occurring The stock likely is not in an overfished condition (e.g., F cur /F 20-50% < 1.0), but no biomass-based reference points established for the stock

Conservation Advice Stock is considered to be healthy at current levels of recruitment (historical average) and fishing mortality (F 2006-2008 ) The stock is expected to fluctuate around the long-term median SSB (~400,000 t) in the short-term under these conditions

Conservation Advice Status is based on average historical recruitment, but recruitment is quite variable over this period A more pessimistic recruitment scenario (e.g., 25% below average, which is within estimated variability) will increase the likelihood that the impact of current F (F 2006-2008 ) on the stock is not sustainable

Peer-review External review of assessment was conducted by CIE in 2011-2012 and reviews will be discussed by WG at July 2012 meeting Goal of review was to assess strengths and weaknesses of assessment and identify improvements

Research to Improve Assessment 1. Age and growth modeling need samples of small (<60 cm) & large fish (>120 cm); look at other growth models 2. Spatial Pattern Analyses movement patterns; spatial size patterns to support appropriate selectivity pattern choices 3. CPUE Analyses investigate discrepancies among indices 4. Maturity develop length-based maturity schedule 5. Data Issues size comp anomalies, socio-economic factors affecting fisheries, national sampling programs 6. Model Improvements weighting of info sources, stockrecruitment relationship, explicit spatial structure, environmental covariates

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