1 Gas Mixing System (GMS) Installation and Operation Manual Version: (September 12, 2017)
2 ii Disclaimer The information in this publication is provided for reference only. Every effort has been made to make this manual as complete and as accurate as possible. However, in no event shall the publisher and author of this document be liable for errors contained herein nor for incidental or consequential damages or injuries in connection with the furnishing, performance or use of this material. All product specifications, as well as the information contained in this publication, are subject to change without notice. This publication may contain or reference information and products protected by copyrights or patents and does not convey any license under our patent rights, nor the rights of others. We do not assume any liability arising out of any infringements of patents or other rights of third parties. We make no warranty of any kind with regard to this material, including but not limited to the implied warranties of merchantability and fitness for a particular purpose. Customers are ultimately responsible for validation of their systems Loligo Systems ApS. All rights reserved. No part of this publication may be stored in a retrieval system, transmitted, or reproduced in any way, including but not limited to photocopy, photograph, magnetic or other record, without our prior written permission. BOBS is a registered trademark of Loligo Systems All rights reserved. All trademarks within are the property of their respective owners.
3 iii Technical Support Loligo Systems ApS Toldboden 3, 2nd floor DK-8800 Viborg Denmark Phone
4 iv Safety notes Please follow these safety guidelines to protect yourself from potential hazards. Please note that this list is not exhaustive and careful handling of the device is required at all times. Loligo Systems is not liable for any injuries arising from inappropriate operation of the device. Please follow these general guidelines: Read all instructions prior to installing, operating and servicing this product Install your equipment as specified in the instruction manual. The GMS must not be installed and operated by unqualified personnel. Connect the product to the specified electrical, gas and pressure sources. Ensure that all power cables and gas tubing are in proper condition and securely connected. Disconnect all power sources when maintenance is being performed, to prevent electrical shock and personal injury. Do not operate this instrument in excess of the specifications marked on and supplied with this product. Failure to heed this warning can result in serious personal injury and/or damage to the equipment. Do not operate the GMS with gases other than oxygen, nitrogen and carbon dioxide to avoid risk to health and damage of the device Only use the GMS in well aerated spaces to avoid depletion of oxygen or harmful levels of carbon dioxide. Do not use the product if it is damaged or defective. References should always be made to the Health and Safety data supplied with any chemicals used. Generally accepted laboratory procedures for safe handling of chemicals should be employed.
5 v Symbols Follow all CAUTION and WARNING notes marked on and supplied with this product to avoid serious injury or damage to the device. Symbol Meaning A CAUTION notice denotes a hazard. It calls attention to an operating procedure, practice, or the like that, if not correctly performed or adhered to, could result in damage to the product or loss of important data. Do not proceed beyond a CAUTION notice until the indicated conditions are fully understood and met. A WARNING notice denotes a hazard. It calls attention to an operating procedure, practice, or the like that, if not correctly performed or adhered to, could result in personal injury or death. Do not proceed beyond a WARNING notice until the indicated conditions are fully understood and met. Danger from electrical voltage. Failure to head this warning may lead to serious injury or death. Information about any essential requirements or actions to operate the instrument. Helpful information that may improve the usability of the instrument. CE mark indicating that the product has been assessed to meet safety and health requirements for products sold in the EEA. According to the directive 2002/96/EG (WEEE), any product labelled with this WEEE symbol must not be disposed of with the domestic waste.
6 vi Intended use of the product The Loligo Systems Gas Mixing System (GMS) is a scientific instrument and exclusively designed to mix oxygen (O 2 ), carbon dioxide (CO 2 ) and nitrogen (N 2 ) gas in research laboratories. Only use gases and apply chemicals with the GMS as specified in Table 1. Loligo Systems will not be liable for any use of gases and chemicals not contained therein. Table 1: Use and application of chemicals approved for the GMS. Chemical/Agent Deionized water Ethanol N 2 gas O 2 gas CO 2 gas Application Cleaning, gas humidification Cleaning Gas mixing The GMS instruments may not be retrofitted by users. Only original parts and accessories as well as pressure rated tubing and connectors must be used for operation and maintenance the GMS instruments. Do not operate the GMS in damp and wet areas or outdoors. The GMS is not designed for medical applications. Any other use as specified in this manual is not permitted.
7 vii Table of Contents DISCLAIMER... II TECHNICAL SUPPORT... III SAFETY NOTES... IV SYMBOLS... V INTENDED USE OF THE PRODUCT... VI TABLE OF CONTENTS... VII TABLE OF FIGURES... IX 1 INTRODUCTION PRODUCT OVERVIEW INSTRUMENT SPECIFICATIONS SHIPMENT COMPONENTS INSTALLATION SYSTEM REQUIREMENTS SOFTWARE Overview Installation Settings HARDWARE Overview GMS installation EXPERIMENT OVERVIEW RUNNING AN EXPERIMENT Choose experiment mode End of experiment TROUBLESHOOTING APPENDIX MAINTENANCE Cleaning Change of fuse... 14
8 viii Calibration service GMS WARRANTY Warranty policy Limitation of Warranty Limitation of Remedies: DISPOSAL DECLARATION OF CONFORMITY INDEX... 17
10 Introduction 1 1 Introduction 1.1 Product overview The Gas Mixing System (GMS) by Loligo Systems performs automated fine-scale mixing of oxygen (O 2 ), carbon dioxide (CO 2 ) and nitrogen (N 2 ) gas using in-built mass flow controllers. The GMS can be readily connected and operated with the Loligo Systems Blood Oxygen Binding System (BOBS ) or customized to any other application, which requires precise mixing of gases. Features Broad and fine-scaled range of O 2 mixtures (0.01% - 100%) CO 2 mixing from 0.03% to 6% Software controlled automated gas mixing Customizable to different gas ranges and gas types Figure 1: GMS rear view
11 Introduction Instrument specifications Type gas flow controller Recommended input pressure* Maximum input pressure Brooks Instruments SLA5850 Rev B Mass Flow Controller 2 bar (± 0.3 bar) 2.5 bar Permitted gas types** N 2, O 2, CO 2 Gas ranges O %, CO % Gas connector type Maximum flow rate*** 6 mm push-in O 2 : 500 ml / min N 2 : 500 ml / min CO 2 : 15 ml / min Communication interface USB 2.0 Flow Accuracy**** Repeatability & Reproducibility Response Time Zero stability Power supply Dimensions Weight ±0.9% of set point (S.P.) (20-100% F.S.), ±0.18% of F.S. (2-20% F.S., 1-20% F.S. from 1-50 lpm) 0.20% S.P. 2 s < ± 0.2% F.S. per year VAC 50/60Hz Height 194 mm, Width 199 mm, Depth 227 mm 11 kg Operating temperature C ( F) *Other input pressures may lead to inaccurate gas mixing **Other gas types on request ***Other flow rates on request **** Flow accuracy N 2 equivalent typical
12 Introduction Shipment components Please check for completeness of the listed components when unpacking. Figure 2: GMS & accessories. Gas mixing system Power cable USB cable USB stick with GMS software and product documentation Two meters 6 mm PU tubing T-piece push-in fitting 3 x push-in hose adapter 4 mm 3 x push-in hose adapter 6 mm
13 Installation 4 2 Installation This chapter outlines how to perform the initial set-up of the GMS software and hardware. 2.1 System requirements One free USB ports on your PC Windows 7 or higher PC with minimum Pentium IV processor of 2,4 GHz and 4GB RAM or better Recommended monitor resolution of 1024x768 pixels 2.2 Software Overview The GMS can be operated as standalone device using the GMS software or as part of the Loligo System`s Blood Oxygen Binding Systems (BOBS ) using the BOBS software (for details see BOBS manual). Both software enable automated and customizable gas mixing experiments. The software setup installs all drivers und the user interface required to operate the GMS Installation To install the GMS software you need to be logged in as administrator or start the installation as administrator. 1. Turn on the PC. 2. Verify that the monitor display is set to a minimum of 1024 x Insert the supplied USB stick into a USB port of your PC. 4. Open the folder of the USB stick. 5. Go to the GMS folder and double-click on GMS.exe. If not logged in as administrator right-click on GMS.exe and select `Run as administrator` from the pop-up menu. 6. Setup now guides you through the installation procedure. Follow the on-screen instructions as they appear.
14 Installation 5 7. After installation is complete restart your PC Settings 1. Double-click on the GMS icon on your desktop. 2. Go to Settings (Figure 3) 3. Adjust the user interface to your preferred graph background or language. Figure 3: Software settings. The GMS software identifies the COM ports allocated to the in-built mass flow controllers automatically. However, communication may fail if two digit COM ports were allocated by Windows. In this case, change the GMS COM ports to one digit numbers in the Windows device manager. 2.3 Hardware Overview Please follow these instructions to connect the GMS to your PC GMS installation You must install the GMS software prior to connecting the GMS to the PC.
15 Installation 6 The GMS weighs 11kg. Please consult help from another person if you are unable to safely lift the device alone. Only install and operate the GMS in well aerated spaces to avoid depletion of O 2 or harmful levels of CO Unpack the GMS and place the device safely on an even and stable surface. Leave approximately 20 cm space at each site to allow for sufficient air circulation at the ventilation slots. Keep the packaging for future transport. 2. Connecting the GMS with gas supplies a. Cut the 6 mm tubing to the required length. b. Push the 6 mm tubing into one of the blue fittings at the rear of the GMS (Figure 4). c. Connect the other end of the tubing to the corresponding gas supply as indicated by the gas type label (Figure 4). d. To connect O 2 gas you may branch the O 2 gas supply into two tubes using the supplied T-piece. The two ends are then connected to the two O 2 gas fittings at the rear of the GMS (Figure 4). Figure 4. Rear of the GMS.
16 Installation 7 Only connect O 2, N 2 and CO 2 gas supplies to the GMS. 3. Connect one end of the provided 6 mm tubing with the orange push-in fitting located at the top-rear of the GMS labelled as `GAS OUT (Figure 4) and the other end with the gas input port of your experimental device. 4. Connect the provided power cable first to the rear of the device and then to a VAC 50/60 Hz power supply. To avoid electrical shock, use a grounded receptacle. Do not connect the GMS to AC power mains without an earthed ground connection. Always connect the AC power cable to the device first and then to the power source. Operation at AC input levels outside of the specified operating voltage range may damage the GMS. 5. Connect the supplied USB cable between the USB port at the rear of the GMS with the USB port of your PC. 6. Check if all tubing is connected tightly and safely. Do not turn on the gas supply until you are certain that all tubing and gas connections are fitted tightly. Failure to heed this warning can result in serious personal injury. 7. Turn the pressure regulator of all gas sources to the lowest level. Then, open the gas supply and slowly increase the pressure till you reach 2 bar for all three gas types. Carefully evaluate tubing and connections for any gas leaks. The GMS will only operate accurately if the input pressure matches the specified calibration pressure of 2 bar. Do not exceed the specified maximum input pressure of 2.5 bar as this may result in serious personal injury and damage to the device. 8. Switch on the red power button at the rear of the GMS. 9. Start the GMS software. 10. The GMS is now ready to use.
17 Experiment 8 3 Experiment 3.1 Overview Title bar Tool bar Graph The title bar displays the experimental time and an arrow to return to the main menu. The tool bar contains a gas unit selector and a STOP EXPERIMENT button to terminate the experiment. The graph window displays the setpoints and actual percentage/flow readings of all three gas types. Graph legend Gas settings Data The graph legend explains the symbols and lines of the current graph display. It further displays data values that are currently selected by the vertical selection bar, which appears when you move over the graph. The display of data can activated/deactivated by clicking on the check mark adjacent to the corresponding data type. In the gas settings, concentration/flow of O 2 and CO 2 can be changed. Under data, concentration and flow of gases are displayed. Figure 5: Experiment overview.
18 Experiment Running an experiment Choose experiment mode 1. Start the GMS software 2. Click on `Experiment 3. In the Experiment checklist choose `Manual or `Automated experiment type from the drop down field (1, Figure 6). 4. Choose a location for the log file to be saved (2, Figure 6). 5. START the experiment (3, Figure 6) Figure 6: Experiment checklist Manual Choose this option if you want flexibility and be able to change gas concentrations manually during the experiment. This mode is most appropriate for establishing new protocols. Afterwards, the settings may then be transferred to the automated protocol. 1. Select a gas unit (1, Figure 7). 2. Set the O 2 concentration/flow in the gas setpoints field (2, Figure 7). 3. Set the carbon dioxide concentration/flow in the gas setpoints field (3, Figure 7). 4. Stop the experiment upon completion (4, Figure 7).
19 Experiment 10 The nitrogen gas concentration is set automatically to obtain a cumulative gas concentration of 100%. Figure 7: Manual mode. 5. Choose to open or save the log file (1, Figure 8) and return to the main menu by clicking on the arrow (2). Figure 8: Experiment summary. Automated
20 Experiment 11 This mode combines flexibility with automation. You can upload your own customized protocol, which the GMS software will run automatically. This mode is most appropriate for established experiments that do not fit the standard protocol. 1. In the Experiment checklist choose `Automated experiment type from the drop down field (1, Figure 9). Figure 9: Automated experiment 2. Select an automated protocol (2). You can create an automated protocol in a standard spread sheet software according to the format in Figure 10, saved as tab delimited txt file. Figure 10: Automated protocol. 3. Choose a location for the log file to be saved (2, Figure 9).
21 Experiment START the experiment (3, Figure 9). 5. The experiment will now run and terminate automatically according to the automated protocol. The timer (1, Figure 11) displays the remaining time for each step and the whole experiment. You may also abort the experiment before automatic completion (2). Figure 11: Automated experiment Once the experiment completes, all gas flows are set to zero to preserve gas supplies End of experiment 1. Once experiments are completed close the GMS software. 2. Turn off all gas supplies. 3. Switch off the GMS using the power button at the rear.
22 Troubleshooting 13 4 Troubleshooting This chapter gives advice and tips to solve problems that may occur while operating the BOBS. Symptom Cause Remedy No gas flow GMS not switched on Switch on GMS No gas flow Gas supply turned off Turn on gas supply No gas flow Gas tubing blocked Assure all tubing is connected tightly to all push-in fittings and connectors No gas flow Leaky gas connection Check for any gas leaks in tubing or connections Low gas flow Insufficient input pressure Assure input pressure of all supply gases is 2 bar GMS software runs slow or stops unexpectedly Insufficient RAM Use a PC with minimum 4 GB RAM * Always contact Loligo Systems ApS prior to shipping the instrument for service.
23 Appendix 14 5 Appendix 5.1 Maintenance Cleaning Use a moist cloth to clean the surfaces of the GMS device. Only use water, ethanol, non-aggressive, non-corrosive and non-abrasive cleaning agents for cleaning. Do not use solvents. Disconnect the GMS from the AC power source before cleaning. Do not wet electrical contacts. Failure to head this warning may lead to death or serious injury Change of fuse The GMS is secured with a fuse to protect the device from high currents. Follow these steps to replace the fuse if blown. 1. Disconnect the power cord at the rear of the GMS. Always disconnect the GMS from the AC power source during any maintenance work. Failure to head this warning may lead to death or serious injury. 2. Carefully lift up the fuse holder using a slotted electrical screw driver (Figure 12A). Figure 12: Change of fuse. 3. Replace the blown fuse with a new one with the exact power rating as specified on the fuse label below (Figure 12B). 4. Replug the fuse holder into the power socket with the plastic clip facing right (Figure 12C).
24 Appendix 15 The use of fuses with power ratings other than specified may damage the device and will void the warranty Calibration service GMS To assure continued accuracy of the GMS we recommend to re-calibrate the GMS every 1-3 years (depending on the frequency of use) using Loligo Systems` gas flow meters or by returning the instrument to Loligo Systems. 5.2 Warranty Warranty policy We offer a 2 year warranty against defects in material or workmanship from date of purchase. If a problem develops during that period, please contact Loligo Systems with a detailed description. If the problem cannot be solved at a distance, we will issue you with a Return of Materials Authorization number (RMA). Loligo Systems cannot accept responsibility for goods returned without an RMA number. Contact Loligo Systems prior to shipping the product to arrange shipping, payment and documentation. Loligo Systems will at its discretion repair or replace the instrument. The warranty specifically excludes damages caused by misuse, abuse or unauthorized modifications or repairs Limitation of Warranty In no event shall Loligo Systems be responsible for any damages suffered by buyer arising out of buyer s own negligence or willful acts or failure to act in connection with the storage, handling or use of Loligo Systems Instruments by buyer or its transferee of risk of loss or damage thereto. After the warranty period has expired Loligo Systems offers a repair, update, and retro-fit service at a fee Limitation of Remedies: Loligo Systems shall not be liable under any circumstances for any special, consequential, incidental, punitive or exemplary damages arising out of or in any way connected with this agreement to sell goods to buyer of the goods, including, but not limited to, damages for lost profits, loss of use, lost data, or for any damages or sums paid by buyer to third parties, even if Loligo Systems has been advised of the possibility of such damages. The foregoing limitation of liability shall apply whether the claim is based upon principles of contract, warranty, negligence, or other tort, breach of any statutory duty, principles of indemnity or contribution, the failure of any limited or exclusive remedy to achieve its essential purpose, or otherwise.
25 Appendix Disposal Before disposal, the device must be decontaminated and cleaned to protect people, the environment and property. Always observe the statutory requirements when disposing the product. According to the directive 2002/96/EG (WEEE), any devices supplied after August 13, 2005, to the business-to-business area this product is assigned to, must not be disposed of with the domestic waste. Because disposal regulations may differ from one country to another, please contact your supplier if necessary. This symbol of the crossed out garbage bin points out that the unit must not be disposed of with the domestic waste.
26 Appendix Declaration of Conformity
27 Index 18 6 Index C Calibration service Cleaning Components... 2 D Declaration of Conformity Disposal E Experiment Experiment mode... 9 Running an experiment... 9 F Fuse I Installation Hardware... 5 Software... 4 Instrument overview... 1 Instrument specifications... 2 M Maintenance S Safety notes... iv Safety symbols... v Settings... 5 System requirements... 4 T Technical support... iii Troubleshooting W Warranty... 15
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