ABI PRISM Mouse Mapping Primers v.1.0

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1 ABI PRISM Mouse Mapping Primers v.1.0 Each marker consists of one forward and one reverse primer labeled on the 5' end with either 6-FAM, VIC, or NED dye. Information including sizing data for the 47 mouse strains is publicly available on the Center for Inherited Disease Research Web site ( Customers who submit a pair-wise combination of inbred strains will receive the informative markers for that cross in return. These sets can then be ordered through Applied Biosystems. However, sizing data, may vary according to the size standard and the instrument used for fragment analysis. Locus Part Number Dye Label cm (Jax) Size Range GT C57BL/6J D1Mit FAM D1Mit VIC D1Mit NED D1Mit NED D1Mit NED D1Mit FAM D1Mit NED Pending D1Mit FAM No size D1Mit VIC D1Mit VIC D1Mit NED D1Mit NED Pending D1Mit FAM D1Mit FAM D1Mit NED D1Mit NED D1Mit NED D1Mit VIC D1Mit VIC D1Mit NED D1Mit FAM D1Mit FAM D1Mit NED D1Mit FAM D1Mit FAM D2Mit NED D2Mit FAM D2Mit FAM Pending D2Mit FAM D2Mit VIC D2Mit VIC D2Mit FAM D2Mit FAM D2Mit FAM D2Mit FAM D2Mit FAM D2Mit NED D2Mit VIC D2Mit NED D2Mit VIC D2Mit FAM

2 D5Mit NED D3Mit FAM D3Mit FAM D3Mit FAM D3Mit VIC D3Mit NED D3Mit NED D3Mit VIC D3Mit VIC D3Mit NED D3Mit VIC D3Mit VIC D3Mit VIC D3Mit NED D3Mit FAM "221,239" D4Mit VIC D4Mit VIC D4Mit NED D4Mit NED D4Mit VIC Pending D4Mit VIC D4Mit VIC D4Mit VIC D4Mit NED D4Mit FAM D4Mit FAM D4Mit VIC D4Mit FAM D4Mit FAM D4Mit NED D4Mit NED D5Mit NED D5Mit FAM D5Mit NED No Size D5Mit NED D5Mit NED D5Mit VIC D5Mit VIC D5Mit FAM D5Mit FAM D5Mit VIC D5Mit NED No Size D5Mit FAM No Size D5Mit FAM D5Mit NED D5Mit FAM D5Mit NED D5Mit NED D5Mit FAM D6Mit VIC Pending D6Mit VIC D6Mit VIC

3 D6Mit FAM D6Mit VIC D6Mit NED D6Mit FAM D6Mit NED D6Mit VIC D6Mit FAM D6Mit FAM D6Mit FAM D6Mit VIC D6Mit VIC D6Mit FAM D6Mit VIC D7Mit NED D7Mit VIC D7Mit FAM D7Mit VIC D7Mit FAM D7Mit NED D7Mit NED D7Mit NED D7Mit VIC D7Mit NED D7Mit FAM D7Mit FAM Pending D7Mit FAM D7Mit NED D7Mit FAM D7Mit VIC D8Mit VIC D8Mit VIC D8Mit NED D8Mit FAM D8Mit VIC D8Mit FAM D8Mit FAM D8Mit VIC Pending D8Mit NED D8Mit VIC D8Mit FAM D8Mit FAM D8Mit FAM D8Mit FAM D8Mit NED D8Mit FAM D9Mit NED D9Mit FAM D9Mit VIC D9Mit NED D9Mit VIC D9Mit NED D9Mit VIC

4 D9Mit NED D9Mit NED D9Mit NED D9Mit VIC D9Mit NED D9Mit VIC D9Mit VIC D9Mit NED D9Mit NED D9Mit VIC D10Mit FAM D10Mit NED D10Mit VIC D10Mit NED D10Mit NED D10Mit FAM D10Mit NED D10Mit FAM D10Mit FAM D10Mit FAM D10Mit VIC D10Mit FAM D10Mit VIC D10Mit NED D10Mit VIC D10Mit FAM D11Mit FAM D11Mit FAM D11Mit FAM D11Mit NED D11Mit VIC D11Mit VIC D11Mit FAM D11Mit VIC D11Mit FAM Pending D11Mit VIC D11Mit NED D11Mit FAM D11Mit NED D11Mit NED D11Mit NED D11Mit VIC D12Mit VIC D12Mit VIC D12Mit FAM D12Mit VIC D12Mit NED D12Mit VIC Pending D12Mit VIC D12Mit VIC D12Mit FAM D12Mit NED

5 D12Mit FAM D12Mit VIC D12Mit VIC D12Nds NED D13Mit FAM Pending D13Mit VIC D13Mit NED D13Mit FAM D13Mit FAM D13Mit FAM D13Mit FAM D13Mit NED D13Mit VIC D13Mit FAM D13Mit VIC D13Mit FAM D13Mit NED D13Mit FAM D13Mit VIC minus D14Mit VIC D14Mit NED Pending D14Mit NED D14Mit NED D14Mit NED D14Mit FAM D14Mit FAM D14Mit NED D14Mit VIC D14Mit NED D14Mit VIC D14Mit FAM D14Mit FAM D14Mit VIC D14Mit FAM D14Mit FAM D14Mit VIC Pending D14Mit FAM D14Mit FAM D14Mit NED D15Mit FAM D15Mit FAM D15Mit FAM D15Mit NED D15Mit VIC D15Mit NED D15Mit VIC D15Mit VIC D15Mit NED D15Mit VIC D15Mit NED D15Mit FAM D15Mit FAM

6 D15Mit VIC D16Mit NED D16Mit VIC D16Mit FAM Pending D16Mit NED Pending D16Mit VIC D16Mit FAM D16Mit FAM D16Mit FAM D16Mit VIC D16Mit VIC D16Mit NED Pending D17Mit NED D17Mit NED D17Mit FAM D17Mit NED D17Mit VIC D17Mit NED D17Mit VIC D17Mit FAM D17Mit FAM D17Mit NED D17Mit FAM D18Mit VIC D18Mit NED D18Mit VIC D18Mit VIC D18Mit NED D18Mit VIC D18Mit NED D18Mit FAM D18Mit VIC D18Mit NED D19Mit VIC D19Mit FAM D19Mit FAM D19Mit VIC D19Mit NED D19Mit FAM D19Mit FAM D19Mit VIC D19Mit VIC D19Mit NED D19Mit NED DXMit FAM "174,184" DXMit NED DXMit NED DXMit FAM DXMit FAM DXMit FAM DXMit NED DXMit NED

7 DXMit VIC DXMit FAM DXMit VIC DXMit VIC DXMit NED DXMit VIC DXMit NED DXMit FAM DXMit FAM D19Mit NED No Size D1Mit NED Pending D3Mit NED D8Mit FAM "55,7" No Size

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